Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PRG3Q9Y2Y8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.75■□□□□ 0.27
PRG3Q9Y2Y8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRG3Q9Y2Y8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 MTHFR-217ENST00000641820 1569 ntBASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 AC015910.1-201ENST00000579400 975 ntBASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 AC124067.4-201ENST00000519691 2379 ntBASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.74■□□□□ 0.27
PRG3Q9Y2Y8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 AC069224.1-201ENST00000566372 1715 ntBASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CSF2RBP1-201ENST00000447905 391 ntBASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 MIR4538-201ENST00000581377 78 ntBASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRG3Q9Y2Y8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.72■□□□□ 0.27
PRG3Q9Y2Y8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms