Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC073439.1-201ENST00000624121 1774 ntBASIC14.68□□□□□ -0.06
TM9SF2Q99805 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PCGF3-213ENST00000620529 1899 ntBASIC14.68□□□□□ -0.06
TM9SF2Q99805 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC069120.2-201ENST00000524091 540 ntBASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AL158211.3-201ENST00000607385 239 ntBASIC14.68□□□□□ -0.06
TM9SF2Q99805 SPTSSB-204ENST00000617024 1292 ntBASIC14.68□□□□□ -0.06
TM9SF2Q99805 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF2Q99805 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF2Q99805 AC136621.1-201ENST00000624017 2304 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 SSR4P1-203ENST00000599569 2260 ntBASIC14.67□□□□□ -0.06
TM9SF2Q99805 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TM9SF2Q99805 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.67□□□□□ -0.06
TM9SF2Q99805 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms