Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 SERBP1P5-201ENST00000510079 1181 ntBASIC16.26■□□□□ 0.19
HAPLN3Q96S86 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 RN7SL204P-201ENST00000582831 262 ntBASIC16.26■□□□□ 0.19
HAPLN3Q96S86 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HAPLN3Q96S86 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AC020658.6-201ENST00000623564 1870 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 MIR661-201ENST00000384842 89 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AL133267.1-201ENST00000398220 340 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 MEP1AP4-201ENST00000423244 1087 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AL589987.1-201ENST00000453380 819 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 MIR4745-201ENST00000577608 62 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LINC02560-201ENST00000596379 459 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AC008761.3-201ENST00000624803 892 ntBASIC16.25■□□□□ 0.19
HAPLN3Q96S86 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
HAPLN3Q96S86 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.24■□□□□ 0.19
HAPLN3Q96S86 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 AC002472.2-201ENST00000442739 958 ntBASIC16.24■□□□□ 0.19
HAPLN3Q96S86 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.24■□□□□ 0.19
HAPLN3Q96S86 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms