Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLPTM1LQ96KA5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 RBM17P3-201ENST00000417687 1192 ntBASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 KRT16P4-201ENST00000453883 522 ntBASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 MIR4515-201ENST00000584082 81 ntBASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 CICP17-201ENST00000418553 2377 ntBASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.15■□□□□ 0.02
CLPTM1LQ96KA5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 ACTL9-202ENST00000612068 1252 ntBASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLPTM1LQ96KA5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms