Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 AC009093.2-202ENST00000620513 2079 ntBASIC13.28□□□□□ -0.28
GCN1Q92616 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GCN1Q92616 LINC01165-201ENST00000445190 1623 ntBASIC13.28□□□□□ -0.28
GCN1Q92616 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 DNM1P48-201ENST00000419538 439 ntBASIC13.28□□□□□ -0.28
GCN1Q92616 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.28□□□□□ -0.28
GCN1Q92616 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
GCN1Q92616 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.28□□□□□ -0.28
GCN1Q92616 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 AC018892.3-201ENST00000623986 2499 ntBASIC13.28□□□□□ -0.28
GCN1Q92616 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GCN1Q92616 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
GCN1Q92616 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCN1Q92616 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCN1Q92616 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.27□□□□□ -0.28
GCN1Q92616 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.27□□□□□ -0.28
GCN1Q92616 AC078814.4-201ENST00000546650 327 ntBASIC13.27□□□□□ -0.28
GCN1Q92616 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GCN1Q92616 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.27□□□□□ -0.28
GCN1Q92616 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCN1Q92616 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCN1Q92616 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCN1Q92616 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
GCN1Q92616 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
GCN1Q92616 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.27□□□□□ -0.29
GCN1Q92616 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.27□□□□□ -0.29
GCN1Q92616 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GCN1Q92616 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.27□□□□□ -0.29
GCN1Q92616 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.27□□□□□ -0.29
GCN1Q92616 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.27□□□□□ -0.29
GCN1Q92616 MIR4254-201ENST00000581063 76 ntBASIC13.27□□□□□ -0.29
GCN1Q92616 AC006116.2-201ENST00000589958 988 ntBASIC13.27□□□□□ -0.29
GCN1Q92616 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.27□□□□□ -0.29
GCN1Q92616 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.27□□□□□ -0.29
GCN1Q92616 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCN1Q92616 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GCN1Q92616 INE2-201ENST00000630399 1874 ntBASIC13.27□□□□□ -0.29
GCN1Q92616 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 HLA-DMA-202ENST00000395303 1007 ntBASIC13.26□□□□□ -0.29
GCN1Q92616 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.26□□□□□ -0.29
GCN1Q92616 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.26□□□□□ -0.29
GCN1Q92616 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC13.26□□□□□ -0.29
GCN1Q92616 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.26□□□□□ -0.29
GCN1Q92616 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.26□□□□□ -0.29
GCN1Q92616 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.26□□□□□ -0.29
GCN1Q92616 AL160191.2-201ENST00000603975 601 ntBASIC13.26□□□□□ -0.29
GCN1Q92616 AC010976.2-201ENST00000609697 852 ntBASIC13.26□□□□□ -0.29
GCN1Q92616 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GCN1Q92616 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.26□□□□□ -0.29
GCN1Q92616 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCN1Q92616 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms