Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.31□□□□□ -0.28
RTN4IP1Q8WWV3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AC073439.1-201ENST00000624121 1774 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AL355306.1-201ENST00000415580 579 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PRYP6-201ENST00000514804 343 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 C20orf181-201ENST00000623918 480 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AC026748.1-201ENST00000624349 3251 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.3□□□□□ -0.28
RTN4IP1Q8WWV3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms