Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 HCG4B-203ENST00000450128 991 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC079776.4-201ENST00000511039 504 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 RNA5SP419-201ENST00000515908 135 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IGHV3-22-201ENST00000520721 359 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AL662844.1-201ENST00000546340 181 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 SLC25A6P4-201ENST00000586535 553 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC139749.1-202ENST00000617529 3139 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AC104581.4-201ENST00000623126 3052 ntBASIC13.69□□□□□ -0.22
CCDC107Q8WV48 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC107Q8WV48 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 U82695.1-201ENST00000635752 1889 ntBASIC13.68□□□□□ -0.22
CCDC107Q8WV48 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TPM4P1-201ENST00000436100 807 ntBASIC13.68□□□□□ -0.22
CCDC107Q8WV48 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AC096734.2-201ENST00000562054 433 ntBASIC13.68□□□□□ -0.22
CCDC107Q8WV48 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 Z83851.2-201ENST00000609564 659 ntBASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AC007064.4-201ENST00000637740 555 ntBASIC13.68□□□□□ -0.22
CCDC107Q8WV48 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms