Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPEB3Q8NE35 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC025048.3-201ENST00000590609 569 ntBASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC005498.2-205ENST00000593218 784 ntBASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC011467.4-201ENST00000594891 528 ntBASIC13.78□□□□□ -0.2
CPEB3Q8NE35 AC005702.4-201ENST00000618393 416 ntBASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CPEB3Q8NE35 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPEB3Q8NE35 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC074338.1-201ENST00000416825 156 ntBASIC13.77□□□□□ -0.21
CPEB3Q8NE35 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 BASP1P1-201ENST00000430708 665 ntBASIC13.77□□□□□ -0.21
CPEB3Q8NE35 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms