Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 NFIC-211ENST00000641145 8399 ntBASIC18.64■□□□□ 0.58
SLF2Q8IX21 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 AC025181.2-201ENST00000606994 802 ntBASIC18.64■□□□□ 0.57
SLF2Q8IX21 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLF2Q8IX21 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLF2Q8IX21 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 AC099336.1-201ENST00000417053 1171 ntBASIC18.63■□□□□ 0.57
SLF2Q8IX21 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 RHOXF1P1-202ENST00000635473 501 ntBASIC18.63■□□□□ 0.57
SLF2Q8IX21 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.63■□□□□ 0.57
SLF2Q8IX21 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLF2Q8IX21 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 AC092658.1-201ENST00000505836 891 ntBASIC18.62■□□□□ 0.57
SLF2Q8IX21 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLF2Q8IX21 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLF2Q8IX21 AL603832.2-201ENST00000566195 2125 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms