Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 AC234644.1-201ENST00000406065 370 ntBASIC19.38■□□□□ 0.69
COL23A1Q86Y22 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 ISCA2P1-201ENST00000425548 448 ntBASIC19.38■□□□□ 0.69
COL23A1Q86Y22 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 RN7SL8P-201ENST00000461771 266 ntBASIC19.38■□□□□ 0.69
COL23A1Q86Y22 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.38■□□□□ 0.69
COL23A1Q86Y22 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL23A1Q86Y22 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TUBB8P8-201ENST00000458717 1058 ntBASIC19.37■□□□□ 0.69
COL23A1Q86Y22 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 ME2P1-201ENST00000426028 1970 ntBASIC19.37■□□□□ 0.69
COL23A1Q86Y22 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL23A1Q86Y22 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AC022188.1-201ENST00000620960 1664 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AL645937.2-201ENST00000396808 931 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AC078991.1-201ENST00000437297 610 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 PUDPP3-201ENST00000445368 636 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AL160314.3-201ENST00000556041 767 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AC090164.2-201ENST00000611487 516 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 MIR6756-201ENST00000616240 63 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AC009084.3-201ENST00000623356 437 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 AL162426.1-201ENST00000624141 743 ntBASIC19.36■□□□□ 0.69
COL23A1Q86Y22 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.36■□□□□ 0.69
COL23A1Q86Y22 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.35■□□□□ 0.69
COL23A1Q86Y22 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL23A1Q86Y22 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms