Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AC009486.1-201ENST00000569860 813 ntBASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DCAF4L1Q3SXM0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 TDH-203ENST00000531764 1110 ntBASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 AP001063.1-201ENST00000568332 529 ntBASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 AC025181.2-201ENST00000606994 802 ntBASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DCAF4L1Q3SXM0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 PCDHA1-201ENST00000378133 2726 ntBASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DCAF4L1Q3SXM0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms