Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDK5Q00535 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK5Q00535 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 HLA-H-201ENST00000383620 1096 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDK5Q00535 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 AL355306.1-201ENST00000415580 579 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 AL671277.1-201ENST00000429656 993 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 AC007967.2-201ENST00000432613 625 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK5Q00535 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK5Q00535 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK5Q00535 AL662844.1-201ENST00000546340 181 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK5Q00535 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK5Q00535 AC026979.3-201ENST00000607315 403 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
CDK5Q00535 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 AC140479.7-201ENST00000636301 2332 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK5Q00535 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 AC068587.6-202ENST00000641839 5619 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 ACE3P-201ENST00000423435 1973 ntBASIC14.2□□□□□ -0.14
CDK5Q00535 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDK5Q00535 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK5Q00535 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK5Q00535 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDK5Q00535 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK5Q00535 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK5Q00535 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK5Q00535 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK5Q00535 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK5Q00535 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CDK5Q00535 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CDK5Q00535 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.19□□□□□ -0.14
CDK5Q00535 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDK5Q00535 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK5Q00535 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDK5Q00535 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDK5Q00535 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CDK5Q00535 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK5Q00535 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDK5Q00535 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDK5Q00535 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 AC084364.1-201ENST00000551967 1556 ntBASIC14.18□□□□□ -0.14
CDK5Q00535 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDK5Q00535 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms