Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC8.89□□□□□ -0.99
RPS29P62273 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC8.89□□□□□ -0.99
RPS29P62273 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC8.89□□□□□ -0.99
RPS29P62273 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
RPS29P62273 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC8.89□□□□□ -0.99
RPS29P62273 AC140912.1-201ENST00000577171 1054 ntBASIC8.89□□□□□ -0.99
RPS29P62273 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RPS29P62273 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC8.89□□□□□ -0.99
RPS29P62273 YTHDF3-AS1-201ENST00000603538 718 ntBASIC8.89□□□□□ -0.99
RPS29P62273 AC007431.3-201ENST00000623221 587 ntBASIC8.89□□□□□ -0.99
RPS29P62273 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC8.89□□□□□ -0.99
RPS29P62273 AMT-224ENST00000635808 1610 ntTSL 5 BASIC8.89□□□□□ -0.99
RPS29P62273 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RPS29P62273 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RPS29P62273 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RPS29P62273 STRN-202ENST00000379213 2254 ntTSL 5 BASIC8.89□□□□□ -0.99
RPS29P62273 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RPS29P62273 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC8.89□□□□□ -0.99
RPS29P62273 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC8.89□□□□□ -0.99
RPS29P62273 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
RPS29P62273 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC8.89□□□□□ -0.99
RPS29P62273 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RPS29P62273 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 CICP13-201ENST00000422015 2789 ntBASIC8.88□□□□□ -0.99
RPS29P62273 AC018695.7-201ENST00000624587 2492 ntBASIC8.88□□□□□ -0.99
RPS29P62273 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 RAC2-204ENST00000406508 893 ntTSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 SOCS2P1-201ENST00000417727 557 ntBASIC8.88□□□□□ -0.99
RPS29P62273 AC134915.1-201ENST00000426461 574 ntBASIC8.88□□□□□ -0.99
RPS29P62273 AL162726.2-201ENST00000438986 1017 ntBASIC8.88□□□□□ -0.99
RPS29P62273 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC8.88□□□□□ -0.99
RPS29P62273 FADS2-205ENST00000517839 469 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 SAMD11P1-201ENST00000571429 661 ntBASIC8.88□□□□□ -0.99
RPS29P62273 COX11-202ENST00000571584 1108 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 AL132655.2-201ENST00000596276 594 ntBASIC8.88□□□□□ -0.99
RPS29P62273 LINC02560-201ENST00000596379 459 ntBASIC8.88□□□□□ -0.99
RPS29P62273 AL049840.4-201ENST00000602422 811 ntBASIC8.88□□□□□ -0.99
RPS29P62273 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC8.88□□□□□ -0.99
RPS29P62273 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 SERF2-217ENST00000630046 862 ntTSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 AL358472.5-202ENST00000641448 1267 ntBASIC8.88□□□□□ -0.99
RPS29P62273 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
RPS29P62273 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
RPS29P62273 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RPS29P62273 AC092127.1-201ENST00000567093 3455 ntBASIC8.88□□□□□ -0.99
RPS29P62273 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
RPS29P62273 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms