Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 AC024075.2-201ENST00000598112 1473 ntBASIC9.17□□□□□ -0.94
TMEM258P61165 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
TMEM258P61165 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC9.17□□□□□ -0.94
TMEM258P61165 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC9.17□□□□□ -0.94
TMEM258P61165 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC9.17□□□□□ -0.94
TMEM258P61165 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TMEM258P61165 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
TMEM258P61165 AC073335.2-201ENST00000610177 3441 ntBASIC9.17□□□□□ -0.94
TMEM258P61165 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 CICP18-201ENST00000406017 2812 ntBASIC9.16□□□□□ -0.94
TMEM258P61165 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 AP001267.2-201ENST00000532619 2086 ntBASIC9.16□□□□□ -0.94
TMEM258P61165 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
TMEM258P61165 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC9.16□□□□□ -0.94
TMEM258P61165 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 FAM90A12P-201ENST00000519497 2375 ntBASIC9.16□□□□□ -0.94
TMEM258P61165 FAM90A24P-201ENST00000520792 2369 ntBASIC9.16□□□□□ -0.94
TMEM258P61165 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TMEM258P61165 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TMEM258P61165 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TMEM258P61165 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms