Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.65□□□□□ -0.06
PER3P56645 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PER3P56645 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.65□□□□□ -0.06
PER3P56645 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
PER3P56645 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
PER3P56645 AC234783.1-201ENST00000441761 496 ntBASIC14.65□□□□□ -0.06
PER3P56645 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 DOC2GP-202ENST00000514950 1163 ntBASIC14.65□□□□□ -0.06
PER3P56645 RNA5SP410-201ENST00000516285 106 ntBASIC14.65□□□□□ -0.06
PER3P56645 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.65□□□□□ -0.06
PER3P56645 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.65□□□□□ -0.06
PER3P56645 AC055876.2-201ENST00000531834 546 ntBASIC14.65□□□□□ -0.06
PER3P56645 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PER3P56645 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 AL139011.1-202ENST00000642063 584 ntBASIC14.65□□□□□ -0.06
PER3P56645 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.65□□□□□ -0.06
PER3P56645 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PER3P56645 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
PER3P56645 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PER3P56645 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
PER3P56645 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
PER3P56645 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.65□□□□□ -0.07
PER3P56645 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.64□□□□□ -0.07
PER3P56645 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.64□□□□□ -0.07
PER3P56645 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.64□□□□□ -0.07
PER3P56645 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PER3P56645 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PER3P56645 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 SPDYE19P-201ENST00000338590 713 ntBASIC14.64□□□□□ -0.07
PER3P56645 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.64□□□□□ -0.07
PER3P56645 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.64□□□□□ -0.07
PER3P56645 TTTY23B-201ENST00000442790 549 ntBASIC14.64□□□□□ -0.07
PER3P56645 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.64□□□□□ -0.07
PER3P56645 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 AC098859.1-201ENST00000502915 1238 ntBASIC14.64□□□□□ -0.07
PER3P56645 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 AC105021.1-202ENST00000570572 669 ntBASIC14.64□□□□□ -0.07
PER3P56645 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.64□□□□□ -0.07
PER3P56645 AC008494.3-201ENST00000606615 944 ntBASIC14.64□□□□□ -0.07
PER3P56645 AC020765.3-201ENST00000613051 740 ntBASIC14.64□□□□□ -0.07
PER3P56645 AC007431.3-201ENST00000623221 587 ntBASIC14.64□□□□□ -0.07
PER3P56645 AC004840.1-201ENST00000636359 365 ntBASIC14.64□□□□□ -0.07
PER3P56645 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.64□□□□□ -0.07
PER3P56645 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PER3P56645 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PER3P56645 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PER3P56645 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms