Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 KRT18P64-201ENST00000434946 1219 ntBASIC16.83■□□□□ 0.28
RAD23BP54727 AC114501.2-201ENST00000439631 535 ntBASIC16.83■□□□□ 0.28
RAD23BP54727 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.83■□□□□ 0.28
RAD23BP54727 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.83■□□□□ 0.28
RAD23BP54727 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.83■□□□□ 0.28
RAD23BP54727 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.83■□□□□ 0.28
RAD23BP54727 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.83■□□□□ 0.28
RAD23BP54727 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
RAD23BP54727 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAD23BP54727 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.83■□□□□ 0.28
RAD23BP54727 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAD23BP54727 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.83■□□□□ 0.28
RAD23BP54727 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.83■□□□□ 0.28
RAD23BP54727 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RAD23BP54727 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.82■□□□□ 0.28
RAD23BP54727 AC126177.1-201ENST00000547829 2218 ntBASIC16.82■□□□□ 0.28
RAD23BP54727 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 BTBD7P1-201ENST00000447253 1453 ntBASIC16.82■□□□□ 0.28
RAD23BP54727 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.82■□□□□ 0.28
RAD23BP54727 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.82■□□□□ 0.28
RAD23BP54727 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 INGX-202ENST00000489074 768 ntBASIC16.82■□□□□ 0.28
RAD23BP54727 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAD23BP54727 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAD23BP54727 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAD23BP54727 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.82■□□□□ 0.28
RAD23BP54727 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
RAD23BP54727 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD23BP54727 FAM8A3P-201ENST00000427218 844 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms