Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 HLA-F-220ENST00000434407 884 ntBASIC13.38□□□□□ -0.27
NKX2-5P52952 AC068472.1-201ENST00000474589 881 ntBASIC13.38□□□□□ -0.27
NKX2-5P52952 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NKX2-5P52952 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX2-5P52952 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 FAM90A12P-201ENST00000519497 2375 ntBASIC13.38□□□□□ -0.27
NKX2-5P52952 FAM90A24P-201ENST00000520792 2369 ntBASIC13.38□□□□□ -0.27
NKX2-5P52952 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX2-5P52952 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX2-5P52952 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-5P52952 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-5P52952 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-5P52952 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-5P52952 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX2-5P52952 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NKX2-5P52952 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-5P52952 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms