Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NR4A2P43354 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A2P43354 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NR4A2P43354 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NR4A2P43354 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A2P43354 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.41□□□□□ -0.1
NR4A2P43354 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A2P43354 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A2P43354 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.41□□□□□ -0.1
NR4A2P43354 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 AC016027.1-202ENST00000607927 1699 ntBASIC14.4□□□□□ -0.1
NR4A2P43354 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.4□□□□□ -0.1
NR4A2P43354 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.4□□□□□ -0.1
NR4A2P43354 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 AP002472.1-201ENST00000577490 586 ntBASIC14.4□□□□□ -0.1
NR4A2P43354 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.4□□□□□ -0.1
NR4A2P43354 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NR4A2P43354 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.4□□□□□ -0.1
NR4A2P43354 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR4A2P43354 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
NR4A2P43354 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
NR4A2P43354 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 ST20-AS1-201ENST00000560255 4223 ntBASIC14.39□□□□□ -0.11
NR4A2P43354 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.39□□□□□ -0.11
NR4A2P43354 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 CICP8-201ENST00000455800 2813 ntBASIC14.39□□□□□ -0.11
NR4A2P43354 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 AC069224.1-201ENST00000566372 1715 ntBASIC14.39□□□□□ -0.11
NR4A2P43354 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.39□□□□□ -0.11
NR4A2P43354 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.39□□□□□ -0.11
NR4A2P43354 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.39□□□□□ -0.11
NR4A2P43354 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.39□□□□□ -0.11
NR4A2P43354 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.39□□□□□ -0.11
NR4A2P43354 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NR4A2P43354 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.39□□□□□ -0.11
NR4A2P43354 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.39□□□□□ -0.11
NR4A2P43354 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms