Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MIR3619-201ENST00000579667 83 ntBASIC20.83■□□□□ 0.93
USP6P35125 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.83■□□□□ 0.93
USP6P35125 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.83■□□□□ 0.93
USP6P35125 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.83■□□□□ 0.92
USP6P35125 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 CLUHP2-201ENST00000426660 1303 ntBASIC20.83■□□□□ 0.92
USP6P35125 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP6P35125 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP6P35125 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
USP6P35125 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
USP6P35125 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP6P35125 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP6P35125 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.83■□□□□ 0.92
USP6P35125 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP6P35125 AC055811.4-201ENST00000624039 1754 ntBASIC20.82■□□□□ 0.92
USP6P35125 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP6P35125 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.82■□□□□ 0.92
USP6P35125 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.82■□□□□ 0.92
USP6P35125 AL136309.1-201ENST00000403917 691 ntBASIC20.82■□□□□ 0.92
USP6P35125 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.82■□□□□ 0.92
USP6P35125 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.82■□□□□ 0.92
USP6P35125 AC138466.3-201ENST00000619983 221 ntBASIC20.82■□□□□ 0.92
USP6P35125 AC138627.1-207ENST00000641560 1006 ntBASIC20.82■□□□□ 0.92
USP6P35125 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP6P35125 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.82■□□□□ 0.92
USP6P35125 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.82■□□□□ 0.92
USP6P35125 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP6P35125 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.81■□□□□ 0.92
USP6P35125 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 ELK2AP-201ENST00000392510 1007 ntBASIC20.81■□□□□ 0.92
USP6P35125 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.81■□□□□ 0.92
USP6P35125 NKAIN1P1-201ENST00000435754 582 ntBASIC20.81■□□□□ 0.92
USP6P35125 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.81■□□□□ 0.92
USP6P35125 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.81■□□□□ 0.92
USP6P35125 NDUFV2P1-201ENST00000596415 907 ntBASIC20.81■□□□□ 0.92
USP6P35125 AC007663.3-201ENST00000609632 465 ntBASIC20.81■□□□□ 0.92
USP6P35125 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.81■□□□□ 0.92
USP6P35125 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP6P35125 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP6P35125 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.81■□□□□ 0.92
USP6P35125 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
USP6P35125 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP6P35125 KRT8P4-201ENST00000509735 1454 ntBASIC20.8■□□□□ 0.92
USP6P35125 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
USP6P35125 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.8■□□□□ 0.92
USP6P35125 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.8■□□□□ 0.92
USP6P35125 AC138649.2-201ENST00000615886 705 ntBASIC20.8■□□□□ 0.92
USP6P35125 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.8■□□□□ 0.92
USP6P35125 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
USP6P35125 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP6P35125 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP6P35125 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP6P35125 RPL5P21-201ENST00000404620 815 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms