Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.29■□□□□ 0.36
GAP43P17677 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 AC073347.1-201ENST00000421633 2643 ntBASIC17.29■□□□□ 0.36
GAP43P17677 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GAP43P17677 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAP43P17677 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 NFIC-211ENST00000641145 8399 ntBASIC17.28■□□□□ 0.36
GAP43P17677 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.28■□□□□ 0.36
GAP43P17677 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.28■□□□□ 0.36
GAP43P17677 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 SPDYE18-201ENST00000510091 1050 ntBASIC17.28■□□□□ 0.36
GAP43P17677 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 AC104794.3-201ENST00000566840 1248 ntBASIC17.28■□□□□ 0.36
GAP43P17677 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.28■□□□□ 0.36
GAP43P17677 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.28■□□□□ 0.36
GAP43P17677 AC000095.1-201ENST00000603208 874 ntBASIC17.28■□□□□ 0.36
GAP43P17677 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.28■□□□□ 0.36
GAP43P17677 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.28■□□□□ 0.36
GAP43P17677 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.28■□□□□ 0.36
GAP43P17677 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.28■□□□□ 0.36
GAP43P17677 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GAP43P17677 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GAP43P17677 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
GAP43P17677 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAP43P17677 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
GAP43P17677 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
GAP43P17677 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 C18orf15-201ENST00000623680 2534 ntBASIC17.27■□□□□ 0.36
GAP43P17677 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.27■□□□□ 0.36
GAP43P17677 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.27■□□□□ 0.36
GAP43P17677 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.27■□□□□ 0.36
GAP43P17677 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.27■□□□□ 0.36
GAP43P17677 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
GAP43P17677 AJ011932.1-201ENST00000621707 465 ntBASIC17.27■□□□□ 0.36
GAP43P17677 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GAP43P17677 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.27■□□□□ 0.36
GAP43P17677 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GAP43P17677 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GAP43P17677 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GAP43P17677 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms