Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RETP07949 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.85■□□□□ 0.13
RETP07949 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.85■□□□□ 0.13
RETP07949 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 FTH1P14-201ENST00000482930 551 ntBASIC15.85■□□□□ 0.13
RETP07949 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.85■□□□□ 0.13
RETP07949 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.85■□□□□ 0.13
RETP07949 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.85■□□□□ 0.13
RETP07949 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RETP07949 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.85■□□□□ 0.13
RETP07949 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.85■□□□□ 0.13
RETP07949 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 RHOXF1P1-202ENST00000635473 501 ntBASIC15.85■□□□□ 0.13
RETP07949 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RETP07949 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RETP07949 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.85■□□□□ 0.13
RETP07949 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RETP07949 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RETP07949 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RETP07949 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RETP07949 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RETP07949 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.84■□□□□ 0.13
RETP07949 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.84■□□□□ 0.13
RETP07949 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.84■□□□□ 0.13
RETP07949 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.84■□□□□ 0.13
RETP07949 FAM86LP-201ENST00000478302 853 ntBASIC15.84■□□□□ 0.13
RETP07949 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.84■□□□□ 0.13
RETP07949 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RETP07949 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.84■□□□□ 0.13
RETP07949 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RETP07949 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.84■□□□□ 0.13
RETP07949 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.84■□□□□ 0.13
RETP07949 AC008687.7-202ENST00000637404 953 ntBASIC15.84■□□□□ 0.13
RETP07949 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.84■□□□□ 0.13
RETP07949 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.84■□□□□ 0.13
RETP07949 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RETP07949 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
RETP07949 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.83■□□□□ 0.13
RETP07949 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.83■□□□□ 0.13
RETP07949 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.83■□□□□ 0.13
RETP07949 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RETP07949 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.83■□□□□ 0.13
RETP07949 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.83■□□□□ 0.13
RETP07949 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RETP07949 SOCS2P1-201ENST00000417727 557 ntBASIC15.83■□□□□ 0.12
RETP07949 AC134915.1-201ENST00000426461 574 ntBASIC15.83■□□□□ 0.12
RETP07949 RPL13AP25-201ENST00000484130 612 ntBASIC15.83■□□□□ 0.12
RETP07949 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RETP07949 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.83■□□□□ 0.12
RETP07949 AC079328.1-201ENST00000560358 952 ntBASIC15.83■□□□□ 0.12
RETP07949 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.83■□□□□ 0.12
RETP07949 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.83■□□□□ 0.12
RETP07949 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.83■□□□□ 0.12
RETP07949 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.83■□□□□ 0.12
RETP07949 AL021578.1-201ENST00000613646 709 ntBASIC15.83■□□□□ 0.12
RETP07949 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.83■□□□□ 0.12
RETP07949 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.83■□□□□ 0.12
RETP07949 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms