Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSDP07339 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
CTSDP07339 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 AC004987.2-201ENST00000395959 1148 ntBASIC13.11□□□□□ -0.31
CTSDP07339 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 EMBP1-201ENST00000458200 901 ntBASIC13.11□□□□□ -0.31
CTSDP07339 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 KRT126P-201ENST00000549467 1181 ntBASIC13.11□□□□□ -0.31
CTSDP07339 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.11□□□□□ -0.31
CTSDP07339 MIR4751-201ENST00000578027 74 ntBASIC13.11□□□□□ -0.31
CTSDP07339 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSDP07339 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 AC024267.1-201ENST00000582320 895 ntBASIC13.11□□□□□ -0.31
CTSDP07339 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 AL691432.3-201ENST00000621860 400 ntBASIC13.11□□□□□ -0.31
CTSDP07339 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CTSDP07339 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 AC004870.1-201ENST00000315132 882 ntBASIC13.1□□□□□ -0.31
CTSDP07339 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.1□□□□□ -0.31
CTSDP07339 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 RNPS1P1-201ENST00000507437 918 ntBASIC13.1□□□□□ -0.31
CTSDP07339 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSDP07339 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSDP07339 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSDP07339 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 AL450472.2-201ENST00000603663 1156 ntBASIC13.1□□□□□ -0.31
CTSDP07339 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.1□□□□□ -0.31
CTSDP07339 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CTSDP07339 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSDP07339 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.1□□□□□ -0.31
CTSDP07339 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSDP07339 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms