Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 AC010141.1-201ENST00000411585 623 ntBASIC6.83□□□□□ -1.32
USH2AO75445 RN7SL846P-201ENST00000467429 292 ntBASIC6.83□□□□□ -1.32
USH2AO75445 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC6.83□□□□□ -1.32
USH2AO75445 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PUDPP3-201ENST00000445368 636 ntBASIC6.83□□□□□ -1.32
USH2AO75445 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 AREG-202ENST00000502307 956 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 POU5F1P2-201ENST00000521750 823 ntBASIC6.83□□□□□ -1.32
USH2AO75445 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 OR10B1P-201ENST00000601666 907 ntBASIC6.83□□□□□ -1.32
USH2AO75445 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TUBB8P7-204ENST00000567960 1332 ntBASIC6.82□□□□□ -1.32
USH2AO75445 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 KRT17P5-201ENST00000332088 839 ntBASIC6.82□□□□□ -1.32
USH2AO75445 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 AK6-201ENST00000380818 1183 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USH2AO75445 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 BX088651.3-201ENST00000418155 352 ntBASIC6.82□□□□□ -1.32
USH2AO75445 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 AL627422.1-201ENST00000434104 580 ntBASIC6.82□□□□□ -1.32
USH2AO75445 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 MIR5001-201ENST00000580185 100 ntBASIC6.82□□□□□ -1.32
USH2AO75445 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 AP005212.2-201ENST00000584979 510 ntBASIC6.82□□□□□ -1.32
USH2AO75445 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 AC021016.3-201ENST00000608367 477 ntBASIC6.82□□□□□ -1.32
USH2AO75445 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USH2AO75445 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 NHP2-202ENST00000314397 599 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms