Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX39AO00148 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX39AO00148 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 PAUPAR-201ENST00000630360 2965 ntBASIC17.66■□□□□ 0.42
DDX39AO00148 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX39AO00148 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DDX39AO00148 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX39AO00148 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX39AO00148 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDX39AO00148 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX39AO00148 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DDX39AO00148 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX39AO00148 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 RN7SL837P-201ENST00000463010 287 ntBASIC17.65■□□□□ 0.42
DDX39AO00148 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX39AO00148 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX39AO00148 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.65■□□□□ 0.42
DDX39AO00148 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.65■□□□□ 0.42
DDX39AO00148 TMEM261P1-201ENST00000604899 340 ntBASIC17.65■□□□□ 0.42
DDX39AO00148 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDX39AO00148 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX39AO00148 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX39AO00148 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.64■□□□□ 0.42
DDX39AO00148 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.64■□□□□ 0.42
DDX39AO00148 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DDX39AO00148 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX39AO00148 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 AL512384.1-201ENST00000406683 331 ntBASIC17.64■□□□□ 0.41
DDX39AO00148 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX39AO00148 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX39AO00148 KRT18P43-201ENST00000469825 1281 ntBASIC17.64■□□□□ 0.41
DDX39AO00148 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX39AO00148 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.64■□□□□ 0.41
DDX39AO00148 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.64■□□□□ 0.41
DDX39AO00148 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX39AO00148 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDX39AO00148 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms