Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AC074386.1-202ENST00000463561 864 ntBASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 FP325330.2-201ENST00000624219 5630 ntBASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AL512652.2-201ENST00000625156 1716 ntBASIC13.94□□□□□ -0.18
DUX4Q9UBX2 AL645728.2-201ENST00000641974 660 ntBASIC13.94□□□□□ -0.18
DUX4Q9UBX2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUX4Q9UBX2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AL603832.2-201ENST00000566195 2125 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 RNU1-129P-201ENST00000384064 167 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AC092865.5-201ENST00000545435 363 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 U1.21-201ENST00000580816 167 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AC010327.4-202ENST00000591484 748 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AC068137.2-201ENST00000605408 478 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 AL031055.1-201ENST00000606362 631 ntBASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms