Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AL645939.2-201ENST00000427340 991 ntBASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.94□□□□□ -0.02
TUBA1CQ9BQE3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AC069335.1-201ENST00000489972 472 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 HLA-J-203ENST00000494367 1087 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 IGHV3-62-201ENST00000520057 340 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AC109322.1-201ENST00000524499 1264 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AL355385.1-201ENST00000606123 409 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AC021097.1-201ENST00000607902 574 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 AC009093.7-201ENST00000623853 1223 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 MROH4P-201ENST00000431302 1578 ntBASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TUBA1CQ9BQE3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1CQ9BQE3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1CQ9BQE3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TUBA1CQ9BQE3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms