Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 AC021087.4-201ENST00000563761 564 ntBASIC12.83□□□□□ -0.36
RAB40CQ96S21 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 PMS2P7-201ENST00000506558 1336 ntBASIC12.83□□□□□ -0.36
RAB40CQ96S21 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC087386.2-201ENST00000623212 4637 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC109635.5-201ENST00000533593 962 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MIR4313-201ENST00000580760 101 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 AL078644.1-201ENST00000609881 752 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.82□□□□□ -0.36
RAB40CQ96S21 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB40CQ96S21 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB40CQ96S21 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AC073439.1-201ENST00000624121 1774 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms