Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CPNE2Q96FN4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.77□□□□□ -0.21
CPNE2Q96FN4 AKAP8P1-201ENST00000434743 1349 ntBASIC13.77□□□□□ -0.21
CPNE2Q96FN4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 RN7SL589P-201ENST00000481268 310 ntBASIC13.77□□□□□ -0.21
CPNE2Q96FN4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 AC145285.3-201ENST00000564603 959 ntBASIC13.77□□□□□ -0.21
CPNE2Q96FN4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPNE2Q96FN4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.76□□□□□ -0.21
CPNE2Q96FN4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 GPX1P2-201ENST00000429271 606 ntBASIC13.76□□□□□ -0.21
CPNE2Q96FN4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 FAM86C2P-203ENST00000528684 1004 ntBASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 SPTSSB-204ENST00000617024 1292 ntBASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CPNE2Q96FN4 AC134407.2-201ENST00000625089 1978 ntBASIC13.76□□□□□ -0.21
CPNE2Q96FN4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms