Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC00528-201ENST00000600723 2160 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AC013726.1-201ENST00000563747 2285 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 AC023908.3-201ENST00000564211 3047 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 CYP4F24P-201ENST00000586049 1580 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 HTR5BP-201ENST00000430851 1154 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 AC243562.1-201ENST00000560672 389 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 AC023024.2-201ENST00000623561 1993 ntBASIC14.18□□□□□ -0.14
PTP4A1Q93096 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTP4A1Q93096 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 AC148477.4-201ENST00000613430 1793 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 AL355306.1-201ENST00000415580 579 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 EEF1DP4-201ENST00000446006 880 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms