Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCDQ92629 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCDQ92629 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SGCDQ92629 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCDQ92629 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SGCDQ92629 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCDQ92629 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCDQ92629 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.48□□□□□ -0.09
SGCDQ92629 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCDQ92629 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.48□□□□□ -0.09
SGCDQ92629 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCDQ92629 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCDQ92629 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.48□□□□□ -0.09
SGCDQ92629 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SGCDQ92629 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.47□□□□□ -0.09
SGCDQ92629 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 LINC00265-3P-201ENST00000447588 903 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 AC093724.1-201ENST00000448659 1027 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SGCDQ92629 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 AC004706.3-202ENST00000621574 984 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SGCDQ92629 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SGCDQ92629 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 AC136759.1-202ENST00000530858 2194 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 AC006504.4-201ENST00000592118 1568 ntBASIC14.47□□□□□ -0.09
SGCDQ92629 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCDQ92629 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SGCDQ92629 AC005252.3-201ENST00000623855 2258 ntBASIC14.46□□□□□ -0.09
SGCDQ92629 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SGCDQ92629 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.46□□□□□ -0.09
SGCDQ92629 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SGCDQ92629 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.46□□□□□ -0.09
SGCDQ92629 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 POM121L3P-201ENST00000419331 1163 ntBASIC14.46□□□□□ -0.09
SGCDQ92629 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCDQ92629 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms