Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
BBS1Q8NFJ9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AC002056.1-201ENST00000395613 760 ntBASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AC004987.2-201ENST00000395959 1148 ntBASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 PDPK2P-202ENST00000562415 1191 ntBASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 RARRES2P8-201ENST00000566335 367 ntBASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS1Q8NFJ9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS1Q8NFJ9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 HLA-A-201ENST00000376802 1334 ntBASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 RNA5SP410-201ENST00000516285 106 ntBASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS1Q8NFJ9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms