Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00311Q8N616 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 AC022144.1-201ENST00000602255 1580 ntBASIC12.73□□□□□ -0.37
LINC00311Q8N616 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00311Q8N616 AL121723.1-201ENST00000445194 1519 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 PMS2P2-201ENST00000425039 1128 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 BASP1P1-201ENST00000430708 665 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 RFPL4AP1-201ENST00000530883 850 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AC009407.1-201ENST00000568958 598 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AL390754.1-201ENST00000619088 582 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AC004461.2-201ENST00000629517 803 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 AL139384.1-201ENST00000612143 3047 ntBASIC12.72□□□□□ -0.37
LINC00311Q8N616 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00311Q8N616 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00311Q8N616 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00311Q8N616 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00311Q8N616 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00311Q8N616 AC138035.3-201ENST00000622706 2791 ntBASIC12.71□□□□□ -0.37
LINC00311Q8N616 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC00311Q8N616 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00311Q8N616 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00311Q8N616 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms