Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL390754.1-201ENST00000619088 582 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AC013268.4-201ENST00000637413 2228 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AP005117.1-202ENST00000581724 1908 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 MIR648-201ENST00000385046 94 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 BASP1P1-201ENST00000430708 665 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 AC097493.3-201ENST00000509725 367 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 AC024267.1-201ENST00000582320 895 ntBASIC13.98□□□□□ -0.17
RTTNQ86VV8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTTNQ86VV8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.98□□□□□ -0.17
RTTNQ86VV8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 CDC14C-201ENST00000428251 1719 ntBASIC13.97□□□□□ -0.17
RTTNQ86VV8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 U91328.1-201ENST00000437528 223 ntBASIC13.97□□□□□ -0.17
RTTNQ86VV8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.97□□□□□ -0.17
RTTNQ86VV8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTTNQ86VV8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 BCYRN1-201ENST00000418539 200 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 REXO1L1P-202ENST00000608646 1974 ntBASIC13.96□□□□□ -0.17
RTTNQ86VV8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RTTNQ86VV8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms