Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 AF238378.1-201ENST00000526806 358 ntBASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 AC025062.2-201ENST00000605477 670 ntBASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 GPX1P2-201ENST00000429271 606 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 FAM197Y8-203ENST00000450145 560 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 FGFR3P6-201ENST00000457012 610 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ACTL9-202ENST00000612068 1252 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 LINC01230-201ENST00000625222 3017 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 AL589702.1-201ENST00000641229 1509 ntBASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.13□□□□□ -0.31
ANKRD55Q3KP44 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms