Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 PTCHD3P3-201ENST00000403073 906 ntBASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 MIR4313-201ENST00000580760 101 ntBASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC6LQ2NKX8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 ACE3P-201ENST00000423435 1973 ntBASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 AC093724.1-201ENST00000448659 1027 ntBASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 AC114341.1-201ENST00000618070 349 ntBASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ERCC6LQ2NKX8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC6LQ2NKX8 NSUN5P1-202ENST00000421140 1535 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms