Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 U91328.1-201ENST00000437528 223 ntBASIC19.26■□□□□ 0.67
ATP2B3Q16720 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.26■□□□□ 0.67
ATP2B3Q16720 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2B3Q16720 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2B3Q16720 AP003680.1-201ENST00000598970 3660 ntBASIC19.26■□□□□ 0.67
ATP2B3Q16720 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.25■□□□□ 0.67
ATP2B3Q16720 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 GK-202ENST00000378941 458 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 CROCCP1-201ENST00000426910 5675 ntBASIC19.25■□□□□ 0.67
ATP2B3Q16720 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2B3Q16720 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2B3Q16720 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 TTTY23B-201ENST00000442790 549 ntBASIC19.24■□□□□ 0.67
ATP2B3Q16720 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AL359711.2-201ENST00000563105 872 ntBASIC19.24■□□□□ 0.67
ATP2B3Q16720 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AL049840.4-201ENST00000602422 811 ntBASIC19.24■□□□□ 0.67
ATP2B3Q16720 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2B3Q16720 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2B3Q16720 AL513523.2-202ENST00000427283 2040 ntBASIC19.24■□□□□ 0.67
ATP2B3Q16720 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2B3Q16720 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2B3Q16720 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP2B3Q16720 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms