Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RAB5BP61020 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5BP61020 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5BP61020 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5BP61020 PCGF3-213ENST00000620529 1899 ntBASIC12.34□□□□□ -0.43
RAB5BP61020 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5BP61020 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5BP61020 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB5BP61020 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB5BP61020 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
RAB5BP61020 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB5BP61020 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB5BP61020 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 AC113367.3-201ENST00000508316 1912 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 AC096733.2-201ENST00000609937 1394 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5BP61020 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5BP61020 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 CROCCP5-201ENST00000436658 830 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5BP61020 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.33□□□□□ -0.44
RAB5BP61020 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5BP61020 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5BP61020 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5BP61020 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB5BP61020 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5BP61020 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 AC092053.3-201ENST00000641308 4975 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
RAB5BP61020 AC073957.3-201ENST00000609998 6758 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 FSCN1P1-201ENST00000568912 1481 ntBASIC12.33□□□□□ -0.44
RAB5BP61020 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5BP61020 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5BP61020 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RAB5BP61020 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 BNIP3P1-202ENST00000550043 1585 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB5BP61020 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms