Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 AC073439.1-201ENST00000624121 1774 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 PTENP1-202ENST00000532280 3996 ntBASIC12.91□□□□□ -0.34
SPCS3P61009 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.91□□□□□ -0.34
SPCS3P61009 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.91□□□□□ -0.34
SPCS3P61009 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.91□□□□□ -0.34
SPCS3P61009 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.91□□□□□ -0.34
SPCS3P61009 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SPCS3P61009 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SPCS3P61009 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.91□□□□□ -0.34
SPCS3P61009 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPCS3P61009 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SPCS3P61009 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 WASH6P-202ENST00000359512 1437 ntBASIC12.9□□□□□ -0.34
SPCS3P61009 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.9□□□□□ -0.34
SPCS3P61009 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 CRYGEP-201ENST00000412192 528 ntBASIC12.9□□□□□ -0.34
SPCS3P61009 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.9□□□□□ -0.34
SPCS3P61009 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SPCS3P61009 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.9□□□□□ -0.34
SPCS3P61009 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 AL121912.1-201ENST00000603683 238 ntBASIC12.9□□□□□ -0.34
SPCS3P61009 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SPCS3P61009 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.9□□□□□ -0.34
SPCS3P61009 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms