Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDN17P56750 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CLDN17P56750 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN17P56750 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLDN17P56750 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLDN17P56750 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC055876.3-201ENST00000431496 288 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 AC241585.1-201ENST00000433527 519 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 TARDBPP1-201ENST00000442013 1203 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.08□□□□□ -0.16
CLDN17P56750 RFPL4AP1-201ENST00000530883 850 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN17P56750 AC138649.4-201ENST00000612222 287 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 AL590560.3-201ENST00000623350 461 ntBASIC14.08□□□□□ -0.16
CLDN17P56750 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN17P56750 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN17P56750 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN17P56750 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN17P56750 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLDN17P56750 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLDN17P56750 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN17P56750 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN17P56750 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN17P56750 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN17P56750 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.07□□□□□ -0.16
CLDN17P56750 AC010336.2-201ENST00000564226 506 ntBASIC14.07□□□□□ -0.16
CLDN17P56750 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN17P56750 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN17P56750 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 AC087499.5-201ENST00000452760 1342 ntBASIC14.07□□□□□ -0.16
CLDN17P56750 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN17P56750 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN17P56750 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN17P56750 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN17P56750 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms