Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.41□□□□□ -0.26
NKX2-5P52952 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX2-5P52952 ACE3P-201ENST00000423435 1973 ntBASIC13.41□□□□□ -0.26
NKX2-5P52952 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 KRT89P-201ENST00000620027 1478 ntBASIC13.41□□□□□ -0.26
NKX2-5P52952 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-5P52952 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-5P52952 AC022497.1-201ENST00000624916 3691 ntBASIC13.41□□□□□ -0.26
NKX2-5P52952 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-5P52952 AC138969.2-201ENST00000532739 9932 ntBASIC13.41□□□□□ -0.26
NKX2-5P52952 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 AP001972.5-201ENST00000624624 2338 ntBASIC13.4□□□□□ -0.26
NKX2-5P52952 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NKX2-5P52952 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX2-5P52952 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
NKX2-5P52952 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NKX2-5P52952 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-5P52952 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-5P52952 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-5P52952 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-5P52952 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-5P52952 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-5P52952 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NKX2-5P52952 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 AC083880.1-201ENST00000608266 535 ntBASIC13.39□□□□□ -0.27
NKX2-5P52952 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX2-5P52952 AL157888.1-201ENST00000631930 593 ntBASIC13.39□□□□□ -0.27
NKX2-5P52952 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-5P52952 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-5P52952 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NKX2-5P52952 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms