Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.51■□□□□ 0.07
GTF2A1P52655 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
GTF2A1P52655 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
GTF2A1P52655 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 FRMD8P1-201ENST00000440433 1524 ntBASIC15.51■□□□□ 0.07
GTF2A1P52655 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.51■□□□□ 0.07
GTF2A1P52655 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2A1P52655 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2A1P52655 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.51■□□□□ 0.07
GTF2A1P52655 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 TUBB8P12-201ENST00000308911 1335 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 TUBB7P-202ENST00000428444 1305 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 TUBB8P7-204ENST00000567960 1332 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
GTF2A1P52655 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.5■□□□□ 0.07
GTF2A1P52655 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 NEK4P2-201ENST00000580004 1012 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 AC024563.2-201ENST00000603282 481 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.5■□□□□ 0.07
GTF2A1P52655 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 CYP2D8P-201ENST00000433633 1490 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GTF2A1P52655 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GTF2A1P52655 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.5■□□□□ 0.07
GTF2A1P52655 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC15.5■□□□□ 0.07
GTF2A1P52655 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GTF2A1P52655 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.49■□□□□ 0.07
GTF2A1P52655 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.49■□□□□ 0.07
GTF2A1P52655 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GTF2A1P52655 AC128688.1-201ENST00000487626 519 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms