Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PAWRP1-201ENST00000451083 565 ntBASIC12.73□□□□□ -0.37
RAB5CP51148 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5CP51148 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB5CP51148 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB5CP51148 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB5CP51148 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5CP51148 AL592071.1-201ENST00000611956 408 ntBASIC12.73□□□□□ -0.37
RAB5CP51148 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5CP51148 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB5CP51148 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5CP51148 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5CP51148 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5CP51148 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
RAB5CP51148 LINC01230-201ENST00000625222 3017 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 HCG4-201ENST00000418983 998 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 PMS2P1-201ENST00000431037 1228 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB5CP51148 AC142381.4-202ENST00000563973 229 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 RNF126P1-202ENST00000569893 925 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 AL365330.1-201ENST00000607459 531 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB5CP51148 AL138966.2-201ENST00000621997 464 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 AC010947.1-201ENST00000623454 693 ntBASIC12.72□□□□□ -0.37
RAB5CP51148 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RAB5CP51148 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RAB5CP51148 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB5CP51148 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5CP51148 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5CP51148 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5CP51148 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5CP51148 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB5CP51148 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB5CP51148 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms