Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 AC074338.1-201ENST00000416825 156 ntBASIC13.54□□□□□ -0.24
CCL1P22362 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 GHSR-202ENST00000427970 912 ntBASIC13.54□□□□□ -0.24
CCL1P22362 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL1P22362 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL1P22362 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL1P22362 AC011467.4-201ENST00000594891 528 ntBASIC13.54□□□□□ -0.24
CCL1P22362 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 AC007292.2-201ENST00000593524 1812 ntBASIC13.54□□□□□ -0.24
CCL1P22362 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
CCL1P22362 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
CCL1P22362 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL1P22362 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL1P22362 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL1P22362 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 Z97205.2-201ENST00000564697 1639 ntBASIC13.53□□□□□ -0.24
CCL1P22362 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCL1P22362 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL1P22362 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL1P22362 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL1P22362 AC023141.5-201ENST00000458585 616 ntBASIC13.53□□□□□ -0.24
CCL1P22362 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 SLED1-202ENST00000512051 380 ntBASIC13.53□□□□□ -0.24
CCL1P22362 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.53□□□□□ -0.24
CCL1P22362 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 AL079307.3-201ENST00000556114 283 ntBASIC13.53□□□□□ -0.24
CCL1P22362 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 AP001059.3-201ENST00000619053 235 ntBASIC13.53□□□□□ -0.24
CCL1P22362 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL1P22362 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCL1P22362 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCL1P22362 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL1P22362 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.52□□□□□ -0.24
CCL1P22362 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL1P22362 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCL1P22362 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms