Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFNA1P01562 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.53□□□□□ -0.4
IFNA1P01562 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
IFNA1P01562 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.52□□□□□ -0.4
IFNA1P01562 AC023024.2-201ENST00000623561 1993 ntBASIC12.52□□□□□ -0.4
IFNA1P01562 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.52□□□□□ -0.4
IFNA1P01562 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.52□□□□□ -0.4
IFNA1P01562 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.52□□□□□ -0.4
IFNA1P01562 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.52□□□□□ -0.4
IFNA1P01562 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.52□□□□□ -0.4
IFNA1P01562 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.52□□□□□ -0.4
IFNA1P01562 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
IFNA1P01562 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFNA1P01562 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.52□□□□□ -0.41
IFNA1P01562 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
IFNA1P01562 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.52□□□□□ -0.41
IFNA1P01562 AL845331.1-201ENST00000424978 1190 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.52□□□□□ -0.41
IFNA1P01562 GCSHP5-201ENST00000443090 522 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.52□□□□□ -0.41
IFNA1P01562 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 AL365330.1-201ENST00000607459 531 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
IFNA1P01562 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 REXO1L3P-201ENST00000622202 1288 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 KRT18P22-201ENST00000402024 1347 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 AC079781.5-202ENST00000641784 3743 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
IFNA1P01562 TP73-AS1-210ENST00000637775 1455 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
IFNA1P01562 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
IFNA1P01562 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFNA1P01562 AC136759.1-202ENST00000530858 2194 ntBASIC12.52□□□□□ -0.41
IFNA1P01562 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 BX640514.1-201ENST00000583223 1918 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 REXO1L2P-201ENST00000425429 2069 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.51□□□□□ -0.41
IFNA1P01562 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 PAWRP1-201ENST00000451083 565 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms