Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SIX6O95475 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SIX6O95475 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.25□□□□□ -0.29
SIX6O95475 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SIX6O95475 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SIX6O95475 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.25□□□□□ -0.29
SIX6O95475 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SIX6O95475 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SIX6O95475 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SIX6O95475 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SIX6O95475 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 AC079776.2-201ENST00000641154 1609 ntBASIC13.24□□□□□ -0.29
SIX6O95475 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.24□□□□□ -0.29
SIX6O95475 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.24□□□□□ -0.29
SIX6O95475 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.24□□□□□ -0.29
SIX6O95475 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 VENTXP7-201ENST00000475503 772 ntBASIC13.24□□□□□ -0.29
SIX6O95475 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.24□□□□□ -0.29
SIX6O95475 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.24□□□□□ -0.29
SIX6O95475 AC073592.4-201ENST00000623827 446 ntBASIC13.24□□□□□ -0.29
SIX6O95475 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.24□□□□□ -0.29
SIX6O95475 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SIX6O95475 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SIX6O95475 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SIX6O95475 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SIX6O95475 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.23□□□□□ -0.29
SIX6O95475 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.23□□□□□ -0.29
SIX6O95475 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SIX6O95475 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SIX6O95475 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SIX6O95475 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.23□□□□□ -0.29
SIX6O95475 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms