Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SNCGO76070 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SNCGO76070 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SNCGO76070 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SNCGO76070 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC10.65□□□□□ -0.71
SNCGO76070 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
SNCGO76070 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SNCGO76070 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SNCGO76070 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SNCGO76070 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.71
SNCGO76070 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SNCGO76070 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SNCGO76070 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SNCGO76070 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 MESTP1-201ENST00000404287 994 ntBASIC10.64□□□□□ -0.71
SNCGO76070 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 KRT18P48-201ENST00000434763 852 ntBASIC10.64□□□□□ -0.71
SNCGO76070 AC116562.2-201ENST00000507042 360 ntBASIC10.64□□□□□ -0.71
SNCGO76070 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC10.64□□□□□ -0.71
SNCGO76070 ABBA01031661.1-201ENST00000634362 1253 ntBASIC10.64□□□□□ -0.71
SNCGO76070 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SNCGO76070 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SNCGO76070 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SNCGO76070 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SNCGO76070 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SNCGO76070 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SNCGO76070 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 HIST1H2APS4-201ENST00000362070 348 ntBASIC10.63□□□□□ -0.71
SNCGO76070 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC10.63□□□□□ -0.71
SNCGO76070 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SNCGO76070 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms