Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN1O60925 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PFDN1O60925 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN1O60925 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 AL031731.1-201ENST00000642131 2094 ntBASIC14.04□□□□□ -0.16
PFDN1O60925 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN1O60925 FAM207BP-201ENST00000447172 505 ntBASIC14.04□□□□□ -0.16
PFDN1O60925 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.04□□□□□ -0.16
PFDN1O60925 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.04□□□□□ -0.16
PFDN1O60925 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN1O60925 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN1O60925 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN1O60925 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN1O60925 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN1O60925 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 IGHV3-52-201ENST00000519770 353 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 AF201337.1-201ENST00000520239 748 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 AC013467.2-201ENST00000605472 835 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN1O60925 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 PCGF3-213ENST00000620529 1899 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 AC023024.2-201ENST00000623561 1993 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 AC134407.3-201ENST00000624035 2139 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms