Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TSSK5P-201ENST00000423978 907 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 PMS2P2-201ENST00000425039 1128 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 SLED1-202ENST00000512051 380 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 IGHV3-42-201ENST00000520410 361 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 ZNF890P-202ENST00000530367 1156 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AL590560.3-201ENST00000623350 461 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 AC073347.1-201ENST00000421633 2643 ntBASIC14.04□□□□□ -0.16
TRAF3IP2O43734 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF3IP2O43734 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC241585.1-201ENST00000433527 519 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 RPL13P2-201ENST00000440687 659 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 RFPL4AP1-201ENST00000530883 850 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC074044.1-201ENST00000609673 707 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AL390754.1-201ENST00000619088 582 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AL109936.8-201ENST00000641772 604 ntBASIC14.03□□□□□ -0.16
TRAF3IP2O43734 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 AC126177.1-201ENST00000547829 2218 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms