Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH17O14917 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDH17O14917 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
PCDH17O14917 AC004987.2-201ENST00000395959 1148 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 SDHAP3-202ENST00000515467 728 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH17O14917 AC243562.2-201ENST00000561247 970 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH17O14917 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDH17O14917 AL844908.2-201ENST00000609461 460 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 AL358472.5-202ENST00000641448 1267 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 AL033527.5-202ENST00000641632 1098 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 LINC02228-204ENST00000642115 2962 ntBASIC15.09■□□□□ 0.01
PCDH17O14917 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDH17O14917 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDH17O14917 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PCDH17O14917 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDH17O14917 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PCDH17O14917 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDH17O14917 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PCDH17O14917 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDH17O14917 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.08■□□□□ 0
PCDH17O14917 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.08■□□□□ 0
PCDH17O14917 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.08■□□□□ 0
PCDH17O14917 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.08■□□□□ 0
PCDH17O14917 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.08■□□□□ 0
PCDH17O14917 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.08■□□□□ 0
PCDH17O14917 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.08■□□□□ 0
PCDH17O14917 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.08■□□□□ 0
PCDH17O14917 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
PCDH17O14917 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.08■□□□□ 0
PCDH17O14917 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDH17O14917 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms