Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 AC021242.3-201ENST00000607598 1377 ntBASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 UNC93B8-201ENST00000511903 705 ntBASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA6Q9Y5G7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA6Q9Y5G7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHGA6Q9Y5G7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA6Q9Y5G7 AC008406.3-201ENST00000620001 1374 ntBASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 KRT16P3-201ENST00000439127 1283 ntBASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA6Q9Y5G7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA6Q9Y5G7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA6Q9Y5G7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 AC010501.1-201ENST00000606270 1962 ntBASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA6Q9Y5G7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 MIR4281-201ENST00000580852 62 ntBASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGA6Q9Y5G7 AC142381.3-201ENST00000568208 1670 ntBASIC22.33■■□□□ 1.17
PCDHGA6Q9Y5G7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA6Q9Y5G7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA6Q9Y5G7 AC092028.1-203ENST00000608262 953 ntBASIC22.33■■□□□ 1.17
PCDHGA6Q9Y5G7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA6Q9Y5G7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHGA6Q9Y5G7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA6Q9Y5G7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 AC011551.1-201ENST00000614101 683 ntBASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
PCDHGA6Q9Y5G7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms